Latest publications from A-RNA members - 2023 Onwards
ADAR1p150 prevents MDA5 and PKR activation via distinct mechanisms to avert fatal autoinflammation.
Hu SB, Heraud-Farlow J, Sun T, Liang Z, Goradia A, Taylor S, Walkley CR, Li JB.
Mol Cell. 2023 Nov 2;83(21):3869-3884.e7. doi: 10.1016/j.molcel.2023.09.018. Epub 2023 Oct 4. PMID: 37797622
Over-expression of ADAR1 in mice does not initiate or accelerate cancer formation in vivo.
Mendez Ruiz S, Chalk AM, Goradia A, Heraud-Farlow J, Walkley CR.
NAR Cancer. 2023 Jun 1;5(2):zcad023. doi: 10.1093/narcan/zcad023. eCollection 2023 Jun. PMID: 37275274
The phenotype of the most common human ADAR1p150 Zα mutation P193A in mice is partially penetrant.
Liang Z, Chalk AM, Taylor S, Goradia A, Heraud-Farlow JE, Walkley CR.
EMBO Rep. 2023 May 4;24(5):e55835. doi: 10.15252/embr.202255835. Epub 2023 Mar 28. PMID: 36975179
Chary S, Hayashi R.
PLoS Biol 21(6): e3002099. https://doi.org/10.1371/journal.pbio.3002099
Nuclear export of circular RNA
Linh H. Ngo, Andrew G. Bert, B. Kate Dredge, Tobias Williams, Vincent Murphy, Wanqiu Li, William B. Hamilton, Kirstyn T. Carey, John Toubia, Katherine A. Pillman, Dawei Liu, Jessica Desogus, Jeffrey A. Chao, Andrew J. Deans, Gregory J. Goodall & Vihandha O. Wickramasinghe
Gayathri Mani, Serene El-Kamand, Bing Wang, David L Baker, Sandro F Ataide, Irina Artsimovitch, Liza Cubeddu, Roland Gamsjaeger
PMID: 37929701. PMCID: PMC10872591 (available on 2024-09-01), DOI: 10.1002/prot.26630
Artificial intelligence and machine learning in RNA biology
Kathi Zarnack, Eduardo Eyras
A better way to create nanoparticles for in vivo treatments
Peter Davis
(2023) Identification of cell barcodes from long-read single-cell RNA-seq with BLAZE
You Y, Prawer YDJ, De Paoli-Iseppi R, Hunt CPJ, Parish CL, Shim H and Clark MB
Genome Biol. 24: 66
NONO enhances mRNA processing of super‐enhancer‐associated GATA2 and HAND2 genes in neuroblastoma
S Zhang, JAL Cooper, YS Chong, A Naveed, C Mayoh, N Jayatilleke
EMBO reports 24 (2), e54977
mRNA vaccine against malaria tailored for liver-resident memory T cells
Mitch Ganley, Lauren E. Holz, Jordan J. Minnell, Maria N. de Menezes, Olivia K. Burn, Kean Chan Yew Poa, Sarah L. Draper, Kieran English, Susanna T. S. Chan, Regan J. Anderson, Benjamin J. Compton, Andrew J. Marshall, Anton Cozijnsen, Yu Cheng Chua, Zhengyu Ge, Kathryn J. Farrand, John C. Mamum, Calvin Xu, Ian A. Cockburn, Katsuyuki Yui, Patrick Bertolino, Stephanie Gras, Jérôme Le Nours, Jamie Rossjohn, Daniel Fernandez-Ruiz, Geoffrey I. McFadden, David F. Ackerley, Gavin F. Painter, Ian F. Hermans & William R. Heath
Fear extinction is regulated by the activity of long noncoding RNAs at the synapse
Liau WS, Zhao Q, Bademosi A, Gormal RS, Gong H, Marshall PR, Periyakaruppiah A, Madugalle SU, Zajaczkowski EL, Leighton LJ, Ren H, Musgrove M, Davies J, Rauch S, He C, Dickinson BC, Li X, Wei W, Meunier FA, Fernández-Moya SM, Kiebler MA, Srinivasan B, Banerjee S, Clark M, Spitale RC, Bredy TW
Nat Commun. 2023 Nov 22;14(1):7616. doi: 10.1038/s41467-023-43535
Madugalle SU, Liau WS, Zhao Q, Li X, Gong H, Marshall PR, Periyakaruppiah A, Zajaczkowski EL, Leighton LJ, Ren H, Musgrove MRB, Davies JWA, Kim G, Rauch S, He C, Dickinson BC, Fulopova B, Fletcher LN, Williams SR, Spitale RC, Bredy TW
J Neurosci. 2023 Oct 25;43(43):7084-7100. doi: 10.1523/JNEUROSCI.0943-23.2023
RNA-binding proteins in cardiovascular biology and disease: the beat goes on
Völkers, M., Preiss, T. & Hentze, M.W.
Nat Rev Cardiol (2024).
PERSPECTIVE: The je ne sais quoi of 5-methylcytosine in messenger RNA
Marco Guarnacci and Thomas Preiss
RNA May 2024 30: 560-569; Published in Advance March 26, 2024, doi:10.1261/rna.079982.124
Mason R. B. Musgrove, Marina Mikhaylova, Timothy W. Bredy
Fear extinction is regulated by long noncoding RNA activity at the synapse.
Liau WS., Zhao Q., Bademosi A., Gormal R., Gong H., Marshall P.R., Periyakaruppiah A., Madugalle S.U., Zajackowski E.L., Leighton L.J., Ren H., Musgrove M., Davies J., Rauch S., He C., Dickinson B.C., Li X., Wei W., Meunier F.A., Fernandez Moya SM., Kiebler M.A., Srinivasan B., Banerjee S., Clark M., Spitale R.C., Bredy T.W.
Nature Communication, 14(1): 7616, 2023
Madugalle SU.#, Liau WS.#, Zhao Q., Li X., Gong H., Marshall P.R., Periyakaruppiah A.,., Zajackowski E.L., Leighton LJ., Ren H.B., Musgrove M., Davies J., Kim G.M., Rauch S., He C., Dickinson B.C., Fletcher L., Fulopova B., Williams S.R., Spitale R.C., Bredy T.W.
Journal of Neuroscience, 43 (43) 7084-7100, 2023: # Equal contribution
Kwok Jian Goh, Yael Altuvia, Liron Argaman, Yair Raz, Amir Bar, Trevor Lithgow, Hanah Margalit, Yunn-Hwen Gan
Attila Horvath, Yoshika Janapala, Katrina Woodward, Shafi Mahmud, Alice Cleynen, Elizabeth E Gardiner, Ross D Hannan, Eduardo Eyras, Thomas Preiss, Nikolay E Shirokikh
Aaron B. Smith, Diep R. Ganguly, Marten Moore, Andrew F. Bowerman, Yoshika Janapala, Nikolay E. Shirokikh, Barry J. Pogson, Peter A. Crisp
Targeting the ribosome to treat multiple myeloma
Maclachlan KH, Gitareja K, Kang J, Cuddihy A, Cao Y, Hein N, Cullinane C, Ang CS, Brajanovski N, Pearson RB, Khot A, Sanij E, Hannan RD, Poortinga G, Harrison SJ
Mol Ther Oncol. 2024 Feb 7;32(1):200771. doi: 10.1016/j.omton.2024.200771. PMID: 38596309; PMCID: PMC10905045.
ADAR1p150 prevents MDA5 and PKR activation via distinct mechanisms to avert fatal autoinflammation
Hu S*, Heraud-Farlow JE*, Sun T, Liang Z, Goradia A, Taylor S, Walkley CR†, Li JB†
Mol Cell 83(21):3869-3884